SNP Profiles of GU 261/P   View Data

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 Key

 1234567891011121314
_Input profile
TTCCTTCCGGTTAAAACCGGGGGGCCAA
1._RUQ_1370
_______AA___GG__
2._RUQ_1370
_______AA___GG__
3._GU_261_/P
_______AA___GG__
4._GU_261_/P
_______AA___GG__
5._GU_261_/P
_______AA___GG__
6._GU_261_/P
_______AA___GG__
7._GU_261_/P
_______AA___GG__
8._GU_261_/P
_______AA___GG__
9._GU_261_/P
_______AA___GG__
10._GU_261_/P
_______AA___GG__
11._GU_261_/P
_______AA___GG__
12._GU_261_/P
_______AA___GG__
13._GU_261_/P
_______AA___GG__
14._GU_261_/P
_______AA___GG__
15._GU_261_/P
_______AA___GG__
16._GU_261_/P
_______AA___GG__
17._GU_261_/P
_______AA___GG__
18._GU_261_/P
_______AA___GG__
19._GU_261_/P
_______AA___GG__
20._GU_261_/P
_______AA___GG__
21._GU_261_/P
_______AA___GG__
22._GU_261_/P
_______AA___GG__
23._GU_261_/P
_______AA___GG__
24._GU_261_/P
_______AA___GG__
25._GU_261_/P
_______AA___GG__
26._GU_261_/P
_______AA___GG__
27._GU_261_/P
_______AA___GG__
28._GU_261_/P
_______AA___GG__
29._GU_261_/P
_______AA___GG__
30._GU_261_/P
_______AA___GG__
31._GU_261_/P
_______AA___GG__
32._GU_261_/P
_______AA___GG__
33._GU_261_/P
_______AA___GG__
34._GU_261_/P
_______AA___GG__
35._GU_261_/P
_______AA___GG__
36._GU_261_/P
_______AA___GG__
37._RUQ_1370
_______AA___GG__
38._RUQ_1370
_______AA___GG__
 1516171819202122232425262728
_Input profile
GGAACTAACCAAAGCCTTACCCTTGGCC
1._RUQ_1370
GG____AA_CC_ACCC___
2._RUQ_1370
_____AA_CC_AC____
3._GU_261_/P
_____AA_CC_AC____
4._GU_261_/P
_____AA_CC_AC____
5._GU_261_/P
_____AA_CC_AC____
6._GU_261_/P
_____AA_CC_AC____
7._GU_261_/P
_____AA_CC_AC____
8._GU_261_/P
_____AA_CC_AC____
9._GU_261_/P
_____AA_CC_AC____
10._GU_261_/P
_____AA_CC_AC____
11._GU_261_/P
_____AA_CC_AC____
12._GU_261_/P
_____AA_CC_AC____
13._GU_261_/P
_____AA_CC_AC____
14._GU_261_/P
_____AA_CC_AC____
15._GU_261_/P
_____AA_CC_AC____
16._GU_261_/P
_____AA_CC_AC____
17._GU_261_/P
_____AA_CC_AC____
18._GU_261_/P
_____AA_CC_AC____
19._GU_261_/P
_____AA_CC_AC____
20._GU_261_/P
_____AA_CC_AC____
21._GU_261_/P
_____AA_CC_AC____
22._GU_261_/P
_____AA_CC_AC____
23._GU_261_/P
_____AA_CC_AC____
24._GU_261_/P
_____AA_CC_AC____
25._GU_261_/P
_____AA_CC_AC____
26._GU_261_/P
_____AA_CC_AC____
27._GU_261_/P
_____AA_CC_AC____
28._GU_261_/P
_____AA_CC_AC____
29._GU_261_/P
_____AA_CC_AC____
30._GU_261_/P
_____AA_CC_AC____
31._GU_261_/P
_____AA_CC_AC____
32._GU_261_/P
_____AA_CC_AC____
33._GU_261_/P
_____AA_CC_AC____
34._GU_261_/P
_______CC_AC____
35._GU_261_/P
_____AA_CC_AC____
36._GU_261_/P
_____AA_CC_AC____
37._RUQ_1370
_______CC_ACCC___
38._RUQ_1370
GG____AA_CC_ACGG___
 2930313233343536373839404142
_Input profile
AACCCCGGAATTTTAAAACTGGGGCCGG
1._RUQ_1370
__CCGGAA__AA__GG-_GG
2._RUQ_1370
AA__GG______GG__GG
3._GU_261_/P
AG__GG______GG__GG
4._GU_261_/P
AG__GG______GG__GG
5._GU_261_/P
AG__GG______GG__GG
6._GU_261_/P
AG__GG______GG__GG
7._GU_261_/P
AG__GG______GG__GG
8._GU_261_/P
AG__GG______GG__GG
9._GU_261_/P
AG__GG______GG__GG
10._GU_261_/P
AG__GG______GG__GG
11._GU_261_/P
AG__GG______GG__GG
12._GU_261_/P
AG__GG______GG__GG
13._GU_261_/P
AG__GG______GG__GG
14._GU_261_/P
AG__GG______GG__GG
15._GU_261_/P
AG__GG______GG__GG
16._GU_261_/P
AG__GG______GG__GG
17._GU_261_/P
AG__GG______GG__GG
18._GU_261_/P
AG__GG______GG__GG
19._GU_261_/P
AG__GG______GG__GG
20._GU_261_/P
AG__GG______GG__GG
21._GU_261_/P
AG__GG______GG__GG
22._GU_261_/P
AG__GG______GG__GG
23._GU_261_/P
AG__GG______GG__GG
24._GU_261_/P
AG__GG______GG__GG
25._GU_261_/P
AG__GG______GG__GG
26._GU_261_/P
AG__GG______GG__GG
27._GU_261_/P
AG__GG______GG__GG
28._GU_261_/P
AG__GG______GG__GG
29._GU_261_/P
AG__GG______GG__GG
30._GU_261_/P
AG__GG______GG__GG
31._GU_261_/P
AG__GG______GG__GG
32._GU_261_/P
AG__GG______GG__GG
33._GU_261_/P
AG__GG______GG__GG
34._GU_261_/P
AG__GG______GG__GG
35._GU_261_/P
AG__GG______GG__GG
36._GU_261_/P
AG__GG______GG__AG
37._RUQ_1370
__________CC___
38._RUQ_1370
___CCAA__AA_CCCCGG_GG
 4344454647484950515253545556
_Input profile
CCCCAACCGGTTCCGGAATTGGTTAGGG
1._RUQ_1370
CC________TT____
2._RUQ_1370
____GG_CC__TT____
3._GU_261_/P
____GG_CC__TT____
4._GU_261_/P
____GG_CC__TT____
5._GU_261_/P
____GG_CC__TT____
6._GU_261_/P
____GG_CC__TT____
7._GU_261_/P
____GG_CC__TT____
8._GU_261_/P
____GG_CC__TT____
9._GU_261_/P
____GG_CC__TT____
10._GU_261_/P
____GG_CC__TT____
11._GU_261_/P
____GG_CC__TT____
12._GU_261_/P
____GG_CC__TT____
13._GU_261_/P
____GG_CC__TT____
14._GU_261_/P
____GG_CC__TT____
15._GU_261_/P
____GG_CC__TT____
16._GU_261_/P
____GG_CC__TT____
17._GU_261_/P
____GG_CC__TT____
18._GU_261_/P
____GG_CC__TT____
19._GU_261_/P
____GG_CC__TT____
20._GU_261_/P
____GG_CC__TT____
21._GU_261_/P
____GG_CC__TT____
22._GU_261_/P
____GG_CC__TT____
23._GU_261_/P
____GG_CC__TT____
24._GU_261_/P
____GG_CC__TT____
25._GU_261_/P
____GG_CC__TT____
26._GU_261_/P
____GG_CC__TT____
27._GU_261_/P
____GG_CC__TT____
28._GU_261_/P
____GG_CC__TT____
29._GU_261_/P
____GG_CC__TT____
30._GU_261_/P
____GG_CC__TT____
31._GU_261_/P
____GG_CC__TT____
32._GU_261_/P
____GG_CC__TT____
33._GU_261_/P
____GG_CC__TT____
34._GU_261_/P
____GG_CC__TT____
35._GU_261_/P
____GG_CC__GT____
36._GU_261_/P
____GG_CC__TT____
37._RUQ_1370
______________
38._RUQ_1370
____GG____AA____
 575859           
_Input profile
CCTTAAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_1370
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_1370
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
11._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
12._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
13._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
14._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
15._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
16._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
17._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
18._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
19._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
20._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
21._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
22._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
23._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
24._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
25._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
26._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
27._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
28._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
29._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
30._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
31._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
32._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
33._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
34._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
35._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
36._GU_261_/P
CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
37._RUQ_1370
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
38._RUQ_1370
GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: GU_261_/P RUQ_1370

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

1._GU_261_/P RUQ_1370

identical
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._GU_261_/P RUQ_1370

identical
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

3._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 11 > F
 Dapeng Zhang, 2016

4._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 8
 Dapeng Zhang, 2016

5._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 6
 Dapeng Zhang, 2016

6._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 5
 Dapeng Zhang, 2016

7._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 4
 Dapeng Zhang, 2016

8._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 3
 Dapeng Zhang, 2016

9._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 2 > FP
 Dapeng Zhang, 2016

10._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 14 > F
 Dapeng Zhang, 2016

11._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 9
 Dapeng Zhang, 2016

12._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 1 > FP
 Dapeng Zhang, 2016

13._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 16
 Dapeng Zhang, 2016

14._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 12
 Dapeng Zhang, 2016

15._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 10
 Dapeng Zhang, 2016

16._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 9
 Dapeng Zhang, 2016

17._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 8
 Dapeng Zhang, 2016

18._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 7
 Dapeng Zhang, 2016

19._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 10
 Dapeng Zhang, 2016

20._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 3
 Dapeng Zhang, 2016

21._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 5
 Dapeng Zhang, 2016

22._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 6
 Dapeng Zhang, 2016

23._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 21
 Dapeng Zhang, 2016

24._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 20
 Dapeng Zhang, 2016

25._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 19
 Dapeng Zhang, 2016

26._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 18
 Dapeng Zhang, 2016

27._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 17
 Dapeng Zhang, 2016

28._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 16
 Dapeng Zhang, 2016

29._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 15
 Dapeng Zhang, 2016

30._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 14
 Dapeng Zhang, 2016

31._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 13
 Dapeng Zhang, 2016

32._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 12
 Dapeng Zhang, 2016

33._GU_261_/P

96.2 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 11
 Dapeng Zhang, 2016

34._GU_261_/P

95.8 %
12 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 15
 Dapeng Zhang, 2016

35._GU_261_/P

92.3 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 2
 Dapeng Zhang, 2016

36._GU_261_/P

92.3 %
13 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: CAMPUS 1 A X2 Y16
 Dapeng Zhang, 2016

37._GU_261_/P RUQ_1370

71.4 %
7 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

38._GU_261_/P RUQ_1370

67.6 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP33 4TcSNP49 5TcSNP52
6TcSNP131 7TcSNP143 8TcSNP144 9TcSNP176 10TcSNP189
11TcSNP194 12TcSNP230 13TcSNP290 14TcSNP305 15TcSNP329
16TcSNP363 17TcSNP421 18TcSNP519 19TcSNP522 20TcSNP529
21TcSNP546 22TcSNP577 23TcSNP589 24TcSNP591 25TcSNP602
26TcSNP640 27TcSNP642 28TcSNP644 29TcSNP645 30TcSNP660
31TcSNP702 32TcSNP723 33TcSNP731 34TcSNP739 35TcSNP800
36TcSNP823 37TcSNP835 38TcSNP836 39TcSNP872 40TcSNP899
41TcSNP945 42TcSNP998 43TcSNP999 44TcSNP1010 45TcSNP1019
46TcSNP1053 47TcSNP1062 48TcSNP1112 49TcSNP1144 50TcSNP1205
51TcSNP1230 52TcSNP1253 53TcSNP1275 54TcSNP1293 55TcSNP1401
56TcSNP1404 57TcSNP1458 58TcSNP1524 59TcSNP1527